Package: repvar 0.1.1

repvar: Extract Samples to Represent All Variables

In population genetics, it's not uncommon to re-genotype sets of samples to use as positive controls in future studies or for diagnostic panels. To save cost, it's often desireable to have the minimum number of samples that represent all of the alleles in the data. This package provides a procedure that will select these samples with alternative options. The name 'repvar' stands for 'REPresent VARiables'.

Authors:Zhian N. Kamvar [cre, aut], Sydney E. Everhart [ctb, dtc]

repvar_0.1.1.tar.gz
repvar_0.1.1.zip(r-4.5)repvar_0.1.1.zip(r-4.4)repvar_0.1.1.zip(r-4.3)
repvar_0.1.1.tgz(r-4.4-any)repvar_0.1.1.tgz(r-4.3-any)
repvar_0.1.1.tar.gz(r-4.5-noble)repvar_0.1.1.tar.gz(r-4.4-noble)
repvar_0.1.1.tgz(r-4.4-emscripten)repvar_0.1.1.tgz(r-4.3-emscripten)
repvar.pdf |repvar.html✨
repvar/json (API)
NEWS

# Install 'repvar' in R:
install.packages('repvar', repos = c('https://zkamvar.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/zkamvar/repvar/issues

Datasets:
  • monilinia - Peach brown rot pathogen _Monilinia fructicola_

On CRAN:

allelesgeneticsmicrosatellite

2.70 score 1 scripts 4 exports 0 dependencies

Last updated 11 days agofrom:31180e285d. Checks:1 OK, 6 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 06 2025
R-4.5-winNOTEJan 06 2025
R-4.5-linuxNOTEJan 06 2025
R-4.4-winNOTEJan 06 2025
R-4.4-macNOTEJan 06 2025
R-4.3-winNOTEJan 06 2025
R-4.3-macNOTEJan 06 2025

Exports:rpv_findrpv_imagerpv_indicesrpv_stats

Dependencies:

Getting Started

Zhian N. Kamvar and Sydney E. Everhart

Rendered fromgetting-started.Rmdusingknitr::rmarkdownon Jan 06 2025.

Last update: 2018-04-05
Started: 2018-04-04