{
  "_id": "6a102783acfb0bcc41c9028e",
  "Package": "epitabulate",
  "Title": "Tables for Epidemiological Analysis",
  "Version": "0.1.0",
  "Authors@R": "c(\nperson(\"Alexander\", \"Spina\", , \"aspina@appliedepi.org\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0001-8425-1867\")),\nperson(\"Zhian N.\", \"Kamvar\", , \"zkamvar@gmail.com\", role = \"aut\",\ncomment = c(ORCID = \"0000-0003-1458-7108\")),\nperson(\"Amy\", \"Gimma\", role = \"aut\"),\nperson(\"Kate\", \"Doyle\", role = \"ctb\"),\nperson(\"Applied Epi Incorporated\", role = \"cph\"),\nperson(\"Medecins Sans Frontieres Operational Centre Amsterdam\", role = \"fnd\")\n)",
  "Description": "Produces tables for descriptive epidemiological analysis.\nThese tables include attack rates, case fatality ratios, and\nmortality rates (with appropriate confidence intervals), with\nadditional functionality to calculate Mantel-Haenszel odds,\nrisk, and incidence rate ratios. The methods implemented follow\nstandard epidemiological approaches described in Rothman et al.\n(2008, ISBN:978-0-19-513554-2). This package is part of the\n'R4EPIs' project <https://R4EPI.github.io/sitrep/>.",
  "License": "GPL-3",
  "URL": "https://R4EPI.github.io/epitabulate/,\nhttps://github.com/R4EPI/epitabulate/",
  "BugReports": "https://github.com/R4EPI/epitabulate/issues",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.2",
  "Config/pak/sysreqs": "libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev\nmake libicu-dev libuv1-dev libxml2-dev libssl-dev libproj-dev\nlibsqlite3-dev libudunits2-dev libnode-dev",
  "Repository": "https://zkamvar.r-universe.dev",
  "Date/Publication": "2025-11-14 11:43:48 UTC",
  "RemoteUrl": "https://github.com/r4epi/epitabulate",
  "RemoteRef": "HEAD",
  "RemoteSha": "6f5539d85bf02ebfe2a78516b7b7f0a520da3b48",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-13 08:37:53 UTC",
    "User": "root"
  },
  "Author": "Alexander Spina [aut, cre] (ORCID:\n<https://orcid.org/0000-0001-8425-1867>),\nZhian N. Kamvar [aut] (ORCID: <https://orcid.org/0000-0003-1458-7108>),\nAmy Gimma [aut],\nKate Doyle [ctb],\nApplied Epi Incorporated [cph],\nMedecins Sans Frontieres Operational Centre Amsterdam [fnd]",
  "Maintainer": "Alexander Spina <aspina@appliedepi.org>",
  "MD5sum": "69e7706c270db7277cb1ee9000b97ee8",
  "_user": "zkamvar",
  "_type": "src",
  "_file": "epitabulate_0.1.0.tar.gz",
  "_fileid": "48a1551ae01030abf1244dd8e8d78f40396bbf28781bd2340791cbc8a0ba7f96",
  "_filesize": 131768,
  "_sha256": "48a1551ae01030abf1244dd8e8d78f40396bbf28781bd2340791cbc8a0ba7f96",
  "_created": "2026-05-13T08:37:53.000Z",
  "_published": "2026-05-22T09:53:07.556Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77356352014,
      "time": 213,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "6965431078"
    },
    {
      "job": 77356352206,
      "time": 205,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6965430625"
    },
    {
      "job": 77356352132,
      "time": 123,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "6965400389"
    },
    {
      "job": 77356352135,
      "time": 181,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6965419991"
    },
    {
      "job": 77356351067,
      "time": 303,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6965356148"
    },
    {
      "job": 77356351306,
      "time": 159,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7157713498"
    },
    {
      "job": 77356352185,
      "time": 155,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "6965410666"
    },
    {
      "job": 77356352169,
      "time": 134,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "6965404115"
    },
    {
      "job": 77356352124,
      "time": 137,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6965405449"
    }
  ],
  "_buildurl": "https://github.com/r-universe/zkamvar/actions/runs/25787823908",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/r4epi/epitabulate",
  "_commit": {
    "id": "6f5539d85bf02ebfe2a78516b7b7f0a520da3b48",
    "author": "Alex Spina <alexfspina@gmail.com>",
    "committer": "Alex Spina <alexfspina@gmail.com>",
    "message": "github release of cran version\n",
    "time": 1763120628
  },
  "_maintainer": {
    "name": "Alexander Spina",
    "email": "aspina@appliedepi.org",
    "login": "aspina7",
    "bluesky": "@aspina.bsky.social",
    "uuid": 18347047,
    "orcid": "0000-0001-8425-1867"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "binom",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "version": ">= 1.0.2",
      "role": "Imports"
    },
    {
      "package": "epikit",
      "version": ">= 0.1.2",
      "role": "Imports"
    },
    {
      "package": "forcats",
      "role": "Imports"
    },
    {
      "package": "glue",
      "role": "Imports"
    },
    {
      "package": "gtsummary",
      "role": "Imports"
    },
    {
      "package": "MASS",
      "role": "Imports"
    },
    {
      "package": "purrr",
      "role": "Imports"
    },
    {
      "package": "rlang",
      "version": ">= 0.4.0",
      "role": "Imports"
    },
    {
      "package": "scales",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "tibble",
      "version": ">= 3.0.0",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "version": ">= 1.0.0",
      "role": "Imports"
    },
    {
      "package": "tidyselect",
      "version": ">= 1.0.0",
      "role": "Imports"
    },
    {
      "package": "broom.helpers",
      "role": "Suggests"
    },
    {
      "package": "cardx",
      "role": "Suggests"
    },
    {
      "package": "covr",
      "role": "Suggests"
    },
    {
      "package": "matchmaker",
      "version": ">= 0.1.0",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    }
  ],
  "_owner": "r4epi",
  "_selfowned": false,
  "_usedby": 1,
  "_updates": [
    {
      "week": "2025-39",
      "n": 1
    },
    {
      "week": "2025-44",
      "n": 4
    },
    {
      "week": "2025-45",
      "n": 2
    },
    {
      "week": "2025-46",
      "n": 3
    }
  ],
  "_tags": [
    {
      "name": "v0.1.0",
      "date": "2025-11-10"
    }
  ],
  "_stars": 8,
  "_contributors": [
    {
      "user": "aspina7",
      "count": 62,
      "uuid": 18347047
    },
    {
      "user": "zkamvar",
      "count": 55,
      "uuid": 3639446
    },
    {
      "user": "amygimma",
      "count": 52,
      "uuid": 3540603
    }
  ],
  "_userbio": {
    "uuid": 3639446,
    "type": "user",
    "name": "Zhian N. Kamvar",
    "description": "Research Software Engineer | Interested in education, pop genetics, evolution, bioinformatics, and R programming"
  },
  "_downloads": {
    "count": 224,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/epitabulate"
  },
  "_devurl": "https://github.com/r4epi/epitabulate",
  "_pkgdown": "https://R4EPI.github.io/epitabulate/",
  "_searchresults": 3,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/epitabulate.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/r4epi/epitabulate",
  "_realowner": "r4epi",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2025-11-13"
    }
  ],
  "_exports": [
    "add_ar",
    "add_cfr",
    "add_crosstabs",
    "add_mr",
    "attack_rate",
    "case_fatality_rate",
    "case_fatality_rate_df",
    "gt_remove_stat",
    "mortality_rate",
    "tbl_cmh"
  ],
  "_help": [
    {
      "page": "add_ar",
      "title": "Add attack rate statistics to a gtsummary table",
      "topics": [
        "add_ar"
      ]
    },
    {
      "page": "add_cfr",
      "title": "Add case fatality rate (CFR) statistics to a gtsummary table",
      "topics": [
        "add_cfr"
      ]
    },
    {
      "page": "add_crosstabs",
      "title": "A {gtsummary} wrapper function that takes a gtsummary univariate regression table and adds appropriate cross tabs by exposure and outcome",
      "topics": [
        "add_crosstabs"
      ]
    },
    {
      "page": "add_mr",
      "title": "Add mortality rate statistics to a gtsummary table",
      "topics": [
        "add_mr"
      ]
    },
    {
      "page": "attack_rate",
      "title": "Rates and Ratios",
      "topics": [
        "attack_rate",
        "case_fatality_rate",
        "case_fatality_rate_df",
        "mortality_rate"
      ]
    },
    {
      "page": "gt_remove_stat",
      "title": "A gtsummary wrapper function that takes a gtsummary object and removes a column from the table body by column name",
      "topics": [
        "gt_remove_stat"
      ]
    },
    {
      "page": "tbl_cmh",
      "title": "A {gtsummary} wrapper function that takes a dataframe and produces crude, stratified and Cochran-Mantel-Haenszel estimates.",
      "topics": [
        "tbl_cmh"
      ]
    }
  ],
  "_readme": "https://github.com/r4epi/epitabulate/raw/HEAD/README.md",
  "_rundeps": [
    "base64enc",
    "bigD",
    "binom",
    "bitops",
    "bslib",
    "cachem",
    "cards",
    "cardx",
    "class",
    "classInt",
    "cli",
    "commonmark",
    "cpp11",
    "curl",
    "DBI",
    "digest",
    "dplyr",
    "e1071",
    "epikit",
    "evaluate",
    "farver",
    "fastmap",
    "fontawesome",
    "forcats",
    "fs",
    "generics",
    "ggplot2",
    "glue",
    "gt",
    "gtable",
    "gtsummary",
    "highr",
    "htmltools",
    "htmlwidgets",
    "isoband",
    "jquerylib",
    "jsonlite",
    "juicyjuice",
    "KernSmooth",
    "knitr",
    "labeling",
    "lifecycle",
    "litedown",
    "magrittr",
    "markdown",
    "MASS",
    "memoise",
    "mime",
    "pillar",
    "pkgconfig",
    "proxy",
    "purrr",
    "R6",
    "rappdirs",
    "RColorBrewer",
    "Rcpp",
    "reactable",
    "reactR",
    "rlang",
    "rmarkdown",
    "s2",
    "S7",
    "sass",
    "scales",
    "sf",
    "stringi",
    "stringr",
    "tibble",
    "tidyr",
    "tidyselect",
    "tinytex",
    "units",
    "utf8",
    "V8",
    "vctrs",
    "viridisLite",
    "withr",
    "wk",
    "xfun",
    "xml2",
    "yaml"
  ],
  "_score": 4.982271233039569,
  "_indexed": false,
  "_nocasepkg": "epitabulate",
  "_universes": [
    "zkamvar"
  ],
  "_indexurl": "https://r4epi.r-universe.dev/epitabulate",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-05-13T08:40:34.000Z",
      "distro": "noble",
      "commit": "6f5539d85bf02ebfe2a78516b7b7f0a520da3b48",
      "fileid": "08d189e3037c996d33d4ef22ebb742e0197727e0d2880edc7f11bc86acddfeb5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zkamvar/actions/runs/25787823908"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-05-13T08:40:34.000Z",
      "distro": "noble",
      "commit": "6f5539d85bf02ebfe2a78516b7b7f0a520da3b48",
      "fileid": "779a31d1fc937d75c767489c2f9e2661c4347f1cb4e92c9c5cdc869721b27404",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zkamvar/actions/runs/25787823908"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-05-13T08:39:29.000Z",
      "commit": "6f5539d85bf02ebfe2a78516b7b7f0a520da3b48",
      "fileid": "57fc7f12c709efb9f8b32cfaff930615c74390e8b3b7cf50f984e6a5ddd9a2f1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zkamvar/actions/runs/25787823908"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-05-13T08:40:13.000Z",
      "commit": "6f5539d85bf02ebfe2a78516b7b7f0a520da3b48",
      "fileid": "653be4dbbcd84cf8696702add060c7ec7f4a42974f4c76281af8a45f887b98dd",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zkamvar/actions/runs/25787823908"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-13T08:39:36.000Z",
      "commit": "6f5539d85bf02ebfe2a78516b7b7f0a520da3b48",
      "fileid": "fcc316b5af9ce88a569bea51d8dc9fc22322872ec827e708f4afa65a7bb95b1b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zkamvar/actions/runs/25787823908"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-13T08:39:14.000Z",
      "commit": "6f5539d85bf02ebfe2a78516b7b7f0a520da3b48",
      "fileid": "34880a5c15b8fd5a8bb1e67a28a2fc8d0e5252ae2f17ce9866f890bf3be9614f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zkamvar/actions/runs/25787823908"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-13T08:39:13.000Z",
      "commit": "6f5539d85bf02ebfe2a78516b7b7f0a520da3b48",
      "fileid": "b21c67e249588f5bb0cfc8649e4da14e807eff32a98c6e2a3822dceb17cd6f9f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/zkamvar/actions/runs/25787823908"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.0",
      "date": "2026-05-22T09:52:51.000Z",
      "commit": "6f5539d85bf02ebfe2a78516b7b7f0a520da3b48",
      "fileid": "1e8758e562e5281382fea7a204719085a745b245ce1a5314c9fca99ae5a092a2",
      "status": "success",
      "buildurl": "https://github.com/r-universe/zkamvar/actions/runs/25787823908"
    }
  ]
}