Package: epidict 0.3.0

Alexander Spina

epidict: Epidemiology Data Dictionaries and Random Data Generators

The 'R4EPIs' project <https://r4epi.github.io/sitrep/> seeks to provide a set of standardized tools for analysis of outbreak and survey data in humanitarian aid settings. This package currently provides standardized data dictionaries from Medecins Sans Frontieres Operational Centre Amsterdam for outbreak scenarios (Acute Jaundice Syndrome, Cholera, Diphtheria, Measles, Meningitis) and surveys (Retrospective mortality and access to care, Malnutrition, Vaccination coverage and Event Based Surveillance) - as described in the following <https://scienceportal.msf.org/assets/standardised-mortality-surveys?utm_source=chatgpt.com>. In addition, a data generator from these dictionaries is provided. It is also possible to read in any Open Data Kit format data dictionary.

Authors:Alexander Spina [aut, cre], Zhian N. Kamvar [aut], Lukas Richter [aut], Patrick Keating [aut], Annick Lenglet [ctb], Applied Epi Incorporated [cph], Medecins Sans Frontieres Operational Centre Amsterdam [fnd]

epidict_0.3.0.tar.gz
epidict_0.3.0.zip(r-4.7)epidict_0.3.0.zip(r-4.6)epidict_0.3.0.zip(r-4.5)
epidict_0.3.0.tgz(r-4.6-any)epidict_0.3.0.tgz(r-4.5-any)
epidict_0.3.0.tar.gz(r-4.7-any)epidict_0.3.0.tar.gz(r-4.6-any)
epidict_0.3.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
epidict/json (API)

# Install 'epidict' in R:
install.packages('epidict', repos = c('https://zkamvar.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/r4epi/epidict/issues

Pkgdown/docs site:https://r4epi.github.io

On CRAN:

Conda:

6.21 score 3 stars 1 packages 3 scripts 218 downloads 5 exports 28 dependencies

Last updated from:af2929949c. Checks:9 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK147
source / vignettesOK192
linux-release-x86_64OK157
macos-release-arm64OK107
macos-oldrel-arm64OK132
windows-develOK110
windows-releaseOK94
windows-oldrelOK89
wasm-releaseOK134

Exports:dict_rename_helpergen_datamsf_dictmsf_dict_rename_helperread_dict

Dependencies:cellrangerclicliprcpp11crayondplyrgenericsgluehmslifecyclemagrittrpillarpkgconfigprettyunitsprogresspurrrR6readxlrematchrlangstringistringrtibbletidyrtidyselectutf8vctrswithr

MSF Outbreak Dictionaries
Acute Jaundice Syndrome (AJS) | Variables in the intersectional dictionary | Option codes in the intersectional dictionary | Variables in the OCA dictionary | Option codes in the OCA dictionary | Cholera | Measles | Meningitis | Diphtheria | Exploring the dictionaries
Rendered fromOutbreaks.Rmdusingknitr::rmarkdown

Last update: 2025-11-02
Started: 2020-02-11

MSF Survey Dictionaries
Retrospective mortality and access to care ("mortality") | Variables in the dictionary | Option codes | Malnutrition ("nutrition") | Vaccination Coverage ("vaccination_long" or "Vaccination_short") | Exploring the dictionaries
Rendered fromSurveys.Rmdusingknitr::rmarkdown

Last update: 2025-11-02
Started: 2020-02-11

Introduction to epidict
Rendered fromintro.Rmdusingknitr::rmarkdown

Last update: 2020-02-11
Started: 2020-02-11