Package: epitabulate 0.0.0.9007
epitabulate: Tables for Epidemiological Analysis
Produces tables for descriptive epidemiological analysis. These tables describe counts of variables in either line-list or survey data (with appropriate confidence intervals), with additional functionality to calculate odds, risk, and incidence rate ratios directly from a linelist across several variables. This package is part of the 'R4EPIs' project <https://R4epis.netlify.com>.
Authors:
epitabulate_0.0.0.9007.tar.gz
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epitabulate.pdf |epitabulate.html✨
epitabulate/json (API)
NEWS
# Install 'epitabulate' in R: |
install.packages('epitabulate', repos = c('https://zkamvar.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/r4epi/epitabulate/issues
Pkgdown:https://r4epi.github.io
Last updated 2 years agofrom:56370b87dd. Checks:OK: 1 ERROR: 6. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 07 2024 |
R-4.5-win | ERROR | Nov 07 2024 |
R-4.5-linux | ERROR | Nov 07 2024 |
R-4.4-win | ERROR | Nov 07 2024 |
R-4.4-mac | ERROR | Nov 07 2024 |
R-4.3-win | ERROR | Nov 07 2024 |
R-4.3-mac | ERROR | Nov 07 2024 |
Exports:add_aradd_cfradd_crosstabsadd_mrattack_ratecase_fatality_ratecase_fatality_rate_dfdata_frame_from_2x2gt_mh_oddsgt_remove_statmortality_ratetab_linelisttab_surveytab_univariate
Dependencies:base64encbigDbinombitopsbslibcachemcardsclassclassIntclicolorspacecommonmarkcpp11curlDBIdigestdplyre1071epikitevaluatefansifarverfastmapfontawesomeforcatsfsgenericsggplot2gluegtgtablegtsummaryhighrhtmltoolshtmlwidgetsisobandjquerylibjsonlitejuicyjuiceKernSmoothknitrlabelinglatticelifecyclemagrittrmarkdownMASSMatrixmemoisemgcvmimeminqamitoolsmunsellnlmenumDerivpillarpkgconfigproxypurrrR6rappdirsRColorBrewerRcppRcppArmadilloreactablereactRrlangrmarkdowns2sassscalessfsrvyrstringistringrsurveysurvivaltibbletidyrtidyselecttinytexunitsutf8V8vctrsviridisLitewithrwkxfunxml2yaml
Readme and manuals
Help Manual
Help page | Topics |
---|---|
A mortality rate wrapper function (using the gtsummary package)that takes a gtsummary object and returns a gtsummary object with attack rate (per given multiple) with 95% confidence interval | add_ar add_cfr add_mr |
Rates and Ratios | attack_rate case_fatality_rate case_fatality_rate_df mortality_rate |
create a data frame from a 2x2 matrix | data_frame_from_2x2 |
A gtsummary wrapper function that takes a gtsummary object and removes a column from the table body by column name | add_crosstabs gt_mh_odds gt_remove_stat |
Tabulate counts and proportions | tab_linelist tab_survey |
Produce odds ratios, risk ratios or incidence rate ratios | tab_univariate |