Package: repvar 0.1.1

repvar: Extract Samples to Represent All Variables

In population genetics, it's not uncommon to re-genotype sets of samples to use as positive controls in future studies or for diagnostic panels. To save cost, it's often desireable to have the minimum number of samples that represent all of the alleles in the data. This package provides a procedure that will select these samples with alternative options. The name 'repvar' stands for 'REPresent VARiables'.

Authors:Zhian N. Kamvar [cre, aut], Sydney E. Everhart [ctb, dtc]

repvar_0.1.1.tar.gz
repvar_0.1.1.zip(r-4.7)repvar_0.1.1.zip(r-4.6)repvar_0.1.1.zip(r-4.5)
repvar_0.1.1.tgz(r-4.6-any)repvar_0.1.1.tgz(r-4.5-any)
repvar_0.1.1.tar.gz(r-4.7-any)repvar_0.1.1.tar.gz(r-4.6-any)
repvar_0.1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
repvar/json (API)
NEWS

# Install 'repvar' in R:
install.packages('repvar', repos = c('https://zkamvar.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/zkamvar/repvar/issues

Datasets:
  • monilinia - Peach brown rot pathogen _Monilinia fructicola_

On CRAN:

Conda:

allelesgeneticsmicrosatellite

2.70 score 1 scripts 4 exports 0 dependencies

Last updated from:31180e285d. Checks:7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64NOTE123
source / vignettesOK160
linux-release-x86_64NOTE121
macos-release-arm64NOTE118
macos-oldrel-arm64NOTE66
windows-develNOTE73
windows-releaseNOTE88
windows-oldrelNOTE77
wasm-releaseOK105

Exports:rpv_findrpv_imagerpv_indicesrpv_stats

Dependencies:

Getting Started

Zhian N. Kamvar and Sydney E. Everhart

Rendered fromgetting-started.Rmdusingknitr::rmarkdownon May 17 2026.

Last update: 2018-04-05
Started: 2018-04-04