Package: repvar 0.1.1

repvar: Extract Samples to Represent All Variables

In population genetics, it's not uncommon to re-genotype sets of samples to use as positive controls in future studies or for diagnostic panels. To save cost, it's often desireable to have the minimum number of samples that represent all of the alleles in the data. This package provides a procedure that will select these samples with alternative options. The name 'repvar' stands for 'REPresent VARiables'.

Authors:Zhian N. Kamvar [cre, aut], Sydney E. Everhart [ctb, dtc]

repvar_0.1.1.tar.gz
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repvar_0.1.1.tgz(r-4.5-any)repvar_0.1.1.tgz(r-4.4-any)repvar_0.1.1.tgz(r-4.3-any)
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repvar.pdf |repvar.html✨
repvar/json (API)
NEWS

# Install 'repvar' in R:
install.packages('repvar', repos = c('https://zkamvar.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/zkamvar/repvar/issues

Datasets:
  • monilinia - Peach brown rot pathogen _Monilinia fructicola_

On CRAN:

allelesgeneticsmicrosatellite

2.70 score 1 scripts 4 exports 0 dependencies

Last updated 2 months agofrom:31180e285d. Checks:1 OK, 7 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 05 2025
R-4.5-winNOTEFeb 05 2025
R-4.5-macNOTEFeb 05 2025
R-4.5-linuxNOTEFeb 05 2025
R-4.4-winNOTEFeb 05 2025
R-4.4-macNOTEFeb 05 2025
R-4.3-winNOTEFeb 05 2025
R-4.3-macNOTEFeb 05 2025

Exports:rpv_findrpv_imagerpv_indicesrpv_stats

Dependencies:

Getting Started

Zhian N. Kamvar and Sydney E. Everhart

Rendered fromgetting-started.Rmdusingknitr::rmarkdownon Feb 05 2025.

Last update: 2018-04-05
Started: 2018-04-04